Table 3
Percentage identity of rRNA gene subunits/spacers and mitochondrial genes within and between Dibothriocephalus dendriticus and Dibothriocephalus ditremus.
| DNA region | Length | D. dendriticus (% identity) | D. ditremus (% identity) | D. dendriticus/D. ditremus (% identity) |
|---|---|---|---|---|
| rRNA gene subunits and spacers | ||||
| ssrDNA | Partial; 2,024 bpa | 100 | 99.9 | 99.8–100 |
| lsrDNA | Partial; 1,413 bpa | 99.9–100 | 99.8–100 | 99.7–99.9 |
| ITS1 rDNA | Partial; 505 bpa | 99.0–100 | 99.2–100 | 99.4–100 |
| ITS2 rDNA | Complete; 464–480 bpa, b | 98.3–100 | 96.3–100 | 96.7–99.6 |
| Mitochondrial genes | ||||
| cox1 mtDNA | Complete; 1,566 bpc | 96.2–100 | 96.0–96.9 | 89.7–91.3 |
| cob mtDNA | Complete; 1,107 bpc | 97.3–100 | 97.0–98.9 | 89.3–90.9 |
ssrDNA, small subunit of rRNA gene; lsrDNA, large subunit of rRNA gene; ITS1, internal transcribed spacer 1; ITS2, internal transcribed spacer 2; cox1, cytochrome c oxidase subunit 1; cob, cytochrome b.
Supplementary Table 1 indicates sequences (see “+” mark in “% identity” column) that were trimmed to the uniform length and used for calculation of the percentage identity;
The length of ITS2 spacer varied from 464 bp to 480 bp due to different number of repetitive motifs and insertions/deletions;
Supplementary Table 2 indicates complete cox1 and cob sequences (see “+” mark in “% identity” column) which were used for calculation of the percentage identity.
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