Open Access

This article has an erratum: [https://doi.org/10.1051/parasite/2023046]


Issue
Parasite
Volume 30, 2023
Article Number 34
Number of page(s) 12
DOI https://doi.org/10.1051/parasite/2023038
Published online 15 September 2023
  1. Abila PP, Kiendrebeogo M, Mutika GN, Parker AG, Robinson AS. 2003. The effect of age on the mating competitiveness of male Glossina fuscipes fuscipes and G. palpalis palpalis. Journal of Insect Science, 3, 13. [CrossRef] [Google Scholar]
  2. Abila PP, Slotman MA, Parmakelis A, Dion KB, Robinson AS, Muwanika VB, Enyaru JCK, Okedi LMA, Lokedi LM, Aksoy S, Caccone A. 2008. High levels of genetic differentiation between Ugandan Glossina fuscipes fuscipes populations separated by Lake Kyoga. PLoS Neglected Tropical Diseases, 2, e242. [CrossRef] [PubMed] [Google Scholar]
  3. Baker MD, Krafsur ES. 2001. Identification and properties of microsatellite markers in tsetse flies Glossina morsitans sensu lato (Diptera: Glossinidae). Molecular Ecology Notes, 1, 234–236. [CrossRef] [PubMed] [Google Scholar]
  4. Benjamini Y, Yekutieli D. 2001. The control of the false discovery rate in multiple testing under dependency. Annals of Statistics, 29, 1165–1188. [CrossRef] [Google Scholar]
  5. Brown JE, Komatsu KJ, Abila PP, Robinson AS, Okedi LMA, Dyer N, Donnelly MJ, Slotman MA, Caccone A. 2008. Polymorphic microsatellite markers for the tsetse fly Glossina fuscipes fuscipes (Diptera: Glossinidae), a vector of human African trypanosomiasis. Molecular Ecology Resources, 8, 1506–1508. [CrossRef] [PubMed] [Google Scholar]
  6. Bruce D. 1915. The Croonian Lectures on trypanosomes causing disease in man and domestic animals in Central Africa: Delivered before the Royal College of Physicians of London. British Medical Journal, 1, 1073–1078. [CrossRef] [PubMed] [Google Scholar]
  7. Budd LT. 1999. DFID-funded tsetse and trypanosomosis research and development since 1980. United Kingdom: Department of International Development. [Google Scholar]
  8. Cavalli-Sforza LL, Edwards AW. 1967. Phylogenetic analysis. Models and estimation procedures. American Journal of Human Genetics, 19, 233–257. [PubMed] [Google Scholar]
  9. Chapuis M-P, Estoup A. 2007. Microsatellite null alleles and estimation of population differentiation. Molecular Biology and Evolution, 24, 621–631. [CrossRef] [PubMed] [Google Scholar]
  10. Coombs JA, Letcher BH, Nislow KH. 2008. create: a software to create input files from diploid genotypic data for 52 genetic software programs. Molecular Ecology Resources, 8, 578–580. [CrossRef] [PubMed] [Google Scholar]
  11. De Beer CJ, Dicko AH, Ntshangase J, Moyaba P, Taioe MO, Mulandane FC, Neves L, Mdluli S, Guerrini L, Bouyer J, Vreysen MJB, Venter GJ. 2021. A distribution model for Glossina brevipalpis and Glossina austeni in Southern Mozambique, Eswatini and South Africa for enhanced area-wide integrated pest management approaches. PLoS Neglected Tropical Diseases, 15, e0009989. [CrossRef] [PubMed] [Google Scholar]
  12. De Beer CJ, Venter GJ, Vreysen MJB. 2016. Improving the diet for the rearing of Glossina brevipalpis Newstead and Glossina austeni Newstead: Blood source and collection – processing – feeding procedures. PLoS One, 11, e0168799. [CrossRef] [PubMed] [Google Scholar]
  13. De Beer CJ, Venter GJ, Vreysen MJB, Mulandane FC, Neves L, Mdluli S, Koekemoer O. 2019. Using genetic and phenetic markers to assess population isolation within the southernmost tsetse fly belt in Africa. Onderstepoort Journal of Veterinary Research, 86, e1–e8. [CrossRef] [PubMed] [Google Scholar]
  14. De Meeûs T, Humair P-F, Grunau C, Delaye C, Renaud F. 2004. Non-Mendelian transmission of alleles at microsatellite loci: an example in Ixodes ricinus, the vector of Lyme disease. International Journal for Parasitology, 34, 943–950. [CrossRef] [PubMed] [Google Scholar]
  15. De Meeûs T, Noûs C. 2023. A new and almost perfectly accurate approximation of the eigenvalue effective population size of a dioecious population: comparisons with other estimates and detailed proofs. Peer Community Journal, 3, e51. [CrossRef] [Google Scholar]
  16. De Meeûs T. 2018. Revisiting FIS, FST, Wahlund effects, and null alleles. Journal of Heredity, 109, 446–456. [CrossRef] [PubMed] [Google Scholar]
  17. De Meeûs T, Chan CT, Ludwig JM, Tsao JI, Patel J, Bhagatwala J, Beati L. 2021. Deceptive combined effects of short allele dominance and stuttering: an example with Ixodes scapularis, the main vector of Lyme disease in the U.S.A. Peer Community Journal, 1, e40. [CrossRef] [Google Scholar]
  18. De Meeûs T, McCoy KD, Prugnolle F, Chevillon C, Durand P, Hurtrez-Boussès S, Renaud F. 2007. Population genetics and molecular epidemiology or how to “débusquer la bête”. Infection, Genetics and Evolution, 7, 308–332. [CrossRef] [PubMed] [Google Scholar]
  19. De Meeûs T, Noûs C. 2022. A simple procedure to detect, test for the presence of stuttering, and cure stuttered data with spreadsheet programs. Peer Community Journal, 2, e52. [CrossRef] [Google Scholar]
  20. De Meeûs T, Ravel S, Rayaisse J-B, Courtin F, Solano P. 2012. Understanding local population genetics of tsetse: the case of an isolated population of Glossina palpalis gambiensis in Burkina Faso. Infection, Genetics and Evolution, 12, 1229–1234. [CrossRef] [PubMed] [Google Scholar]
  21. Dempster AP, Laird NM, Rubin DB. 1977. Maximum likelihood from incomplete data via the EM algorithm. Journal of the Royal Statistical Society: Series B (Methodological), 39, 1–22. [CrossRef] [Google Scholar]
  22. Do C, Waples RS, Peel D, Macbeth GM, Tillett BJ, Ovenden JR. 2014. NeEstimator v2: re-implementation of software for the estimation of contemporary effective population size (Ne) from genetic data. Molecular Ecology Resources, 14, 209–214. [CrossRef] [PubMed] [Google Scholar]
  23. Faircloth BC. 2008. msatcommander: detection of microsatellite repeat arrays and automated, locus-specific primer design. Molecular Ecology Resources, 8, 92–94. [CrossRef] [PubMed] [Google Scholar]
  24. Feldmann U, Dyck VA, Mattioli RC, Jannin J. 2005. Potential impact of tsetse fly control involving the sterile insect technique, in Sterile insect technique. Principles and practice in area-wide integrated pest management, Dyck VA, Hendrichs J, Robinson AS, Editors. Springer: Dordrecht, The Netherlands. p. 701–723. [Google Scholar]
  25. Feldmann U, Dyck V, Mattioli R, Jannin J, Vreysen M, Dyck VA, Hendrichs J, Robinson AS. 2021. Impact of tsetse fly eradication programmes using the sterile insect technique, Sterile insect technique. Principles and practice in area-wide integrated pest management, 2nd edn, Dyck VA, Hendrichs J, Robinson AS, Editors. CRC Press: Boca Raton, FL. p. 1051–1080. [Google Scholar]
  26. Frontier S. 1976. Étude de la décroissance des valeurs propres dans une analyse en composantes principales: comparaison avec le modèle du bâton brisé. Journal of Experimental Marine Biology and Ecology, 25, 67–75. [CrossRef] [Google Scholar]
  27. Gooding RH, Krafsur ES. 2005. Tsetse genetics: contributions to biology, systematics, and control of tsetse flies. Annual Review of Entomology, 50, 101–123. [CrossRef] [PubMed] [Google Scholar]
  28. Goudet J. 2003. FSTAT, a program to estimate and test gene diversities and fixation indices, version 2.9.3, https://www2.unil.ch/popgen/softwares/fstat.htm. [Google Scholar]
  29. Goudet J, Raymond M, de Meeüs T, Rousset F. 1996. Testing differentiation in diploid populations. Genetics, 144, 1933–1940. [PubMed] [Google Scholar]
  30. Green CH. 1994. Bait methods for tsetse fly control. Advances in Parasitology, 34, 229–291. [Google Scholar]
  31. Hendrichs J, Vreysen M, Enkerlin W, Cayol J. 2021. Strategic options in using sterile insects for area-wide integrated pest management, in Sterile insect technique. Principles and practice in area-wide integrated pest management, 2nd edn. Dyck VA, Hendrichs J, Robinson AS, Editors. CRC Press: Boca Raton, FL. p. 841–884. [Google Scholar]
  32. Holmes PH, Torr SJ. 1988. The control of animal trypanosomiasis in Africa: current methods and future trends. Outlook on Agriculture, 17, 54–60. [CrossRef] [Google Scholar]
  33. Holmes P. 2013. Tsetse-transmitted trypanosomes – Their biology, disease impact and control. Journal of Invertebrate Pathology, 112, S11–S14. [CrossRef] [PubMed] [Google Scholar]
  34. Hursey BS. 2001. The programme against Africa trypanosomiasis: aims, objectives and achievements. Trends in Parasitology, 17, 2–3. [CrossRef] [PubMed] [Google Scholar]
  35. Jones OR, Wang J. 2010. COLONY: a program for parentage and sibship inference from multilocus genotype data. Molecular Ecology Resources, 10, 551–555. [CrossRef] [Google Scholar]
  36. Jordan AM. 1986. Trypanosomiasis control and African rural development. London: Longman. [Google Scholar]
  37. Kappmeier K. 2000. A newly developed odour-baited “H trap” for the live collection of Glossina brevipalpis and Glossina austeni (Diptera: Glossinidae) in South Africa. Onderstepoort Journal of Veterinary Research, 67, 15–26. [Google Scholar]
  38. Kappmeier K, Nevill EM. 1999. Evaluation of a proposed odour-baited target to control the tsetse flies Glossina brevipalpis and Glossina austeni (Diptera: Glossinidae) in South Africa. Onderstepoort Journal of Veterinary Research, 66, 327–332. [Google Scholar]
  39. Krafsur E. 2009. Tsetse flies: genetics, evolution, and role as vectors. Infection, Genetics and Evolution, 9, 124–141. [CrossRef] [PubMed] [Google Scholar]
  40. Luna C, Bonizzoni M, Cheng Q, Robinson AS, Aksoy S, Zheng L. 2001. Microsatellite polymorphism in tsetse flies (Diptera: Glossinidae). Journal of Medical Entomology, 38, 376–381. [CrossRef] [PubMed] [Google Scholar]
  41. Manangwa O, De Meeûs T, Grébaut P, Ségard A, Byamungu M, Ravel S. 2019. Detecting Wahlund effects together with amplification problems: cryptic species, null alleles and short allele dominance in Glossina pallidipes populations from Tanzania. Molecular Ecology Resources, 19, 757–772. [CrossRef] [PubMed] [Google Scholar]
  42. Meirmans PG. 2006. Using the AMOVA framework to estimate a standardized genetic differentiation measure. Evolution; International Journal of Organic Evolution, 60, 2399–2402. [CrossRef] [PubMed] [Google Scholar]
  43. Meirmans PG, Hedrick PW. 2011. Assessing population structure: F(ST) and related measures. Molecular Ecology Resources, 11, 5–18. [CrossRef] [PubMed] [Google Scholar]
  44. Moloo SK. 1993. The distribution of Glossina species in Africa and their natural hosts. International Journal of Tropical Insect Science, 14, 511–527. [CrossRef] [Google Scholar]
  45. Nei M, Chesser RK. 1983. Estimation of fixation indices and gene diversities. Annals of Human Genetics, 47, 253–259. [CrossRef] [PubMed] [Google Scholar]
  46. Nomura T. 2008. Estimation of effective number of breeders from molecular coancestry of single cohort sample. Evolutionary Applications, 1, 462–474. [CrossRef] [PubMed] [Google Scholar]
  47. Ouma JO, Cummings MA, Jones KC, Krafsur ES. 2003. Characterization of microsatellite markers in the tsetse fly, Glossina pallidipes (Diptera: Glossinidae). Molecular Ecology Notes, 3, 450–453. [CrossRef] [PubMed] [Google Scholar]
  48. Ouma JO, Marquez JG, Krafsur ES. 2006. New polymorphic microsatellites in Glossina pallidipes (Diptera: Glossinidae) and their cross-amplification in other tsetse fly taxa. Biochemical Genetics, 44, 471–477. [CrossRef] [PubMed] [Google Scholar]
  49. Peel D, Waples RS, Macbeth GM, Do C, Ovenden JR. 2013. Accounting for missing data in the estimation of contemporary genetic effective population size (N(e)). Molecular Ecology Resources, 13, 243–253. [CrossRef] [PubMed] [Google Scholar]
  50. R Studio Team. 2021. RStudio: Integrated Development for R, http://www.rstudio.com/. [Google Scholar]
  51. Ravel S, Séré M, Manangwa O, Kagbadouno M, Mahamat MH, Shereni W, Okeyo WA, Argiles-Herrero R, De Meeûs T. 2020. Developing and quality testing of microsatellite loci for four species of Glossina. Infection, Genetics and Evolution, 85, 104515. [CrossRef] [PubMed] [Google Scholar]
  52. Rayaisse J-B, Courtin F, Mahamat MH, Chérif M, Yoni W, Gadjibet NMO, Peka M, Solano P, Torr SJ, Shaw APM. 2020. Delivering “tiny targets” in a remote region of southern Chad: a cost analysis of tsetse control in the Mandoul sleeping sickness focus. Parasites & Vectors, 13, 419. [CrossRef] [PubMed] [Google Scholar]
  53. Simpson JT, Wong K, Jackman SD, Schein JE, Jones SJM, Birol İ. 2009. ABySS: a parallel assembler for short read sequence data. Genome Research, 19, 1117–1123. [CrossRef] [PubMed] [Google Scholar]
  54. Solano P, Duvallet G, Dumas V, Cuisance D, Cuny G. 1997. Microsatellite markers for genetic population studies in Glossina palpalis (Diptera: Glossinidae). Acta Tropica, 65, 175–180. [CrossRef] [PubMed] [Google Scholar]
  55. Solano P, Kaba D, Ravel S, Dyer NA, Sall B, Vreysen MJB, Seck MT, Darbyshir H, Gardes L, Donnelly MJ, De Meeus T, Bouyer J. 2010. Population genetics as a tool to select tsetse control strategies: suppression or eradication of Glossina palpalis gambiensis in the Niayes of Senegal. PLoS Neglected Tropical Diseases, 4, e692. [CrossRef] [PubMed] [Google Scholar]
  56. Solano P, Ravel S, de Meeûs T. 2010. How can tsetse population genetics contribute to African trypanosomiasis control? Trends in Parasitology, 26, 255–263. [CrossRef] [PubMed] [Google Scholar]
  57. Tamura K, Stecher G, Kumar S. 2021. MEGA11: molecular evolutionary genetics analysis version 11. Molecular Biology and Evolution, 38, 3022–3027. [CrossRef] [PubMed] [Google Scholar]
  58. Taylor K, Authié EML. 2004. Pathogenesis of animal trypanosomiasis, in The trypanosomiases, 1st edn. Maudlin I, Holmes PH, Miles MA, Editors. CABI Publishing: UK. p. 331–353. [CrossRef] [Google Scholar]
  59. Vitalis R, Couvet D. 2001. Estimation of effective population size and migration rate from one- and two-locus identity measures. Genetics, 157, 911–925. [CrossRef] [PubMed] [Google Scholar]
  60. Vitalis R, Denis D. 2001. ESTIM 1.0: a computer program to infer population parameters from one- and two-locus gene identity probabilities. Molecular Ecology Notes, 1, 354–356. [CrossRef] [Google Scholar]
  61. Vreysen MJB, Saleh KM, Ali MY, Abdulla AM, Zhu Z-R, Juma KG, Dyck VA, Msangi AR, Mkonyi PA, Feldmann HU. 2000. Glossina austeni (Diptera: Glossinidae) eradicated on the island of Unguja, Zanzibar, using the sterile insect technique. Journal of Economic Entomology, 93, 123–135. [CrossRef] [PubMed] [Google Scholar]
  62. Vreysen MJB, Seck MT, Sall B, Bouyer J. 2013. Tsetse flies: their biology and control using area-wide integrated pest management approaches. Journal of Invertebrate Pathology, 112(Suppl), S15–S25. [CrossRef] [PubMed] [Google Scholar]
  63. Wang H-L, Yang J, Boykin LM, Zhao Q-Y, Wang Y-J, Liu S-S, Wang X-W. 2014. Developing conversed microsatellite markers and their implications in evolutionary analysis of the Bemisia tabaci complex. Scientific Reports, 4, 6351. [CrossRef] [PubMed] [Google Scholar]
  64. Wang J. 2015. Does GST underestimate genetic differentiation from marker data? Molecular Ecology, 24, 3546–3558. [CrossRef] [PubMed] [Google Scholar]
  65. Wang J. 2009. A new method for estimating effective population sizes from a single sample of multilocus genotypes. Molecular Ecology, 18, 2148–2164. [CrossRef] [PubMed] [Google Scholar]
  66. Wang J. 2016. A comparison of single-sample estimators of effective population sizes from genetic marker data. Molecular Ecology, 25, 4692–4711. [CrossRef] [PubMed] [Google Scholar]
  67. Waples R. 2006. A bias correction for estimates of effective population size based on linkage disequilibrium at unlinked gene loci. Conservation Genetics, 7, 167–184. [CrossRef] [Google Scholar]
  68. Weir BS, Cockerham CC. 1984. Estimating f-statistics for the analysis of population structure. Evolution, 38, 1358–1370. [Google Scholar]
  69. Wiegmann BM, Trautwein MD, Winkler IS, Barr NB, Kim J-W, Lambkin C, Bertone MA, Cassel BK, Bayless KM, Heimberg AM, Wheeler BM, Peterson KJ, Pape T, Sinclair BJ, Skevington JH, Blagoderov V, Caravas J, Kutty SN, Schmidt-Ott U, Kampmeier GE, Thompson FC, Grimaldi DA, Beckenbach AT, Courtney GW, Friedrich M, Meier R, Yeates DK. 2011. Episodic radiations in the fly tree of life. Proceedings of the National Academy of Sciences, 108, 5690–5695. [CrossRef] [PubMed] [Google Scholar]
  70. Wint W, Rogers D. 2000. Predicted distributions of tsetse in Africa. Report of the environmental research group Oxford Ltd and TALA research group. Rome: Department of Zoology, University of Oxford for the Animal Health Service of the Animal Production and Health Division of the Food and Agriculture Organisation of the United Nations. [Google Scholar]
  71. Wyss JH. 2000. Screwworm eradication in the Americas. Annals of the New York Academy of Sciences, 916, 186–193. [Google Scholar]

Current usage metrics show cumulative count of Article Views (full-text article views including HTML views, PDF and ePub downloads, according to the available data) and Abstracts Views on Vision4Press platform.

Data correspond to usage on the plateform after 2015. The current usage metrics is available 48-96 hours after online publication and is updated daily on week days.

Initial download of the metrics may take a while.