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Table 3

Polymorphism and genetic diversity of the three mitochondrial and concatenated genes of Leucocytozoon spp. and Plasmodium spp. as detected in chicken samples in Thailand and other countries.

Genes Size (bp) N VS GC% Dh (mean ± SD) π (mean ± SD) K
Sequence of Leucocytozoon spp.
cytb 248 32 65 27.54 0.736 + 0.078 0.06354 + 0.01628 13.153
coxI 588 20 228 26.53 0.995 + 0.018 0.162286 + 0.01514 64.332
coxIII 294 19 93 23.65 0.83 + 0.085 0.07056 + 0.02758 17.146
Concatenated gene 1130 20 149 26.05 0.932 + 0.039 0.06002 + 0.02524 26.83
Sequence of Plasmodium spp.
cytb 248 8 46 24.09 1 + 0.063 0.0911 + 0.01155 18.857
coxI 588 13 104 25.33 1 + 0.030 0.0962 + 0.00702 38
coxIII 294 11 73 21.43 1 + 0.039 0.11904 + 0.00972 28.927
Concatenated gene 1130 8 123 23.91 1 + 0.063 0.1079 + 0.01084 48.139

N = number of analyzed sequences; VS = number of variable sites; GC = G × C content; Dh = diversity of haplotypes; SD = standard deviation; π = nucleotide diversity (per site); K = average number of nucleotide differences.

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