Table 3
Polymorphism and genetic diversity of the three mitochondrial and concatenated genes of Leucocytozoon spp. and Plasmodium spp. as detected in chicken samples in Thailand and other countries.
| Genes | Size (bp) | N | VS | GC% | Dh (mean ± SD) | π (mean ± SD) | K |
|---|---|---|---|---|---|---|---|
| Sequence of Leucocytozoon spp. | |||||||
| cytb | 248 | 32 | 65 | 27.54 | 0.736 + 0.078 | 0.06354 + 0.01628 | 13.153 |
| coxI | 588 | 20 | 228 | 26.53 | 0.995 + 0.018 | 0.162286 + 0.01514 | 64.332 |
| coxIII | 294 | 19 | 93 | 23.65 | 0.83 + 0.085 | 0.07056 + 0.02758 | 17.146 |
| Concatenated gene | 1130 | 20 | 149 | 26.05 | 0.932 + 0.039 | 0.06002 + 0.02524 | 26.83 |
| Sequence of Plasmodium spp. | |||||||
| cytb | 248 | 8 | 46 | 24.09 | 1 + 0.063 | 0.0911 + 0.01155 | 18.857 |
| coxI | 588 | 13 | 104 | 25.33 | 1 + 0.030 | 0.0962 + 0.00702 | 38 |
| coxIII | 294 | 11 | 73 | 21.43 | 1 + 0.039 | 0.11904 + 0.00972 | 28.927 |
| Concatenated gene | 1130 | 8 | 123 | 23.91 | 1 + 0.063 | 0.1079 + 0.01084 | 48.139 |
N = number of analyzed sequences; VS = number of variable sites; GC = G × C content; Dh = diversity of haplotypes; SD = standard deviation; π = nucleotide diversity (per site); K = average number of nucleotide differences.
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