Table 3
Representative genomes of Acanthamoeba spp. available and collected from GenBank, and corrected through information provided by Fuerst (2020).
| Organism | Strain | Sequencing technology | Genome size (Mb) | Assembly access number | Publication date | Reference |
|---|---|---|---|---|---|---|
| A. astronyxis | ATCC 30137 | NA | 83.4 | GCA_000826245 | January 2015 | † |
| A. castellanii | ATCC 50370 | NA | 115 | GCA_000826485 | January 2015 | † |
| A. castellanii str. Neff | ATCC 30010 | Illumina GA IIx, 454 GS FLX Titanium and Sanger | 42 | GCA_000313135 | January 2013 | [14] |
| A. culbertsoni | ATCC 30171 | NA | 55.5 | GCA_000826265 | January 2015 | † |
| A. palestinensis | ATCC 30870 | NA | 75.3 | GCA_000826305 | January 2015 | † |
| A. lenticulata | ATCC 30841 | NA | 66 | GCA_000826285 | January 2015 | † |
| A. lugdunensis | ATCC 50240 | NA | 99.4 | GCA_000826425 | January 2015 | † |
| A. mauritaniensis | ATCC 50253 | NA | 106.8 | GCA_000826465 | January 2015 | † |
| A. triangularis | ATCC 50254 | NA | 103.5 | GCA_000826325 | January 2015 | † |
| Acanthamoeba sp. | ATCC 50496 | NA | 115.6 | GCA_000826505 | January 2015 | † |
| A. polyphaga | ATCC 50372 | NA | 120.4 | GCA_000826345 | January 2015 | † |
| A. polyphaga | Linc Ap-1 | IonTorrent | 49.35 | GCA_001567625 | February 2016 | [43] |
| A. quina | ATCC 50241 | NA | 83.6 | GCA_000826445 | January 2015 | † |
| A. rhysodes | ATCC 30973 | N/A | 75.8 | GCA_000826385 | January 2015 | † |
| A. royreba | ATCC 30884 | N/A | 79.5 | GCA_000826365 | January 2015 | † |
| A. comandoni | ATCC Pra 287 | Ion Torrent PGM | 86.2 | GCA_002025285 | March 2017 | ‡ |
| A. lenticulata | ATCC 50704 | Ion Torrent PGM | 74.7 | GCA_002105255 | April 2017 | ‡ |
| A. triangularis | ATCC 50254 | Illumina MiSeq | 66.4 | *CACVKS010000000 | March 2020 | [32] |
| A. pyriformis | CR15 | Illumina HiSeq 2500 | 683.1 | **SRX2163158 | January 2017 | [72] |
N/A = Information not available in BioProject placed in GenBank.
Unpublished, BioProject created by University of Liverpool: https://www.ncbi.nlm.nih.gov/bioproject/PRJEB7687.
Unpublished, created by AIT Austrian Institute of Technology: https://www.ncbi.nlm.nih.gov/assembly/GCA_002105255.1.
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