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Table 2
Data from the assembled genomes of Naegleria spp.
Organism | Sequencing technology | Genome size (Mb) | %GC | ORFs | Strain | GenBank assembly accession | Data publication date | Reference |
---|---|---|---|---|---|---|---|---|
N. fowleri | Illumina HiSeq 2000 and Roche 454 – GS FLX | 27.7 | 37 | 17,252 | ATCC 30863 | GCA_000499105 | November 2013 | [75] |
N. fowleri | Illumina HiSeq and Roche 454 – GS FLX | 27.7 | 36 | 12,677 | V212 | *PRJNA562275 | August 2019 | [34] |
N. fowleri | Illumina – Hiseq 2000 | 27.5 | 36 | 11,599 | 986 | GCA_902703645 | February 2020 | [34] |
N. fowleri | Oxford Nanopore – GridION | 29.5 | 36.9 | 13,925 | ATCC 30894 | GCA_008403515 | September 2019 | [47] |
N. gruberi | Sanger | 40.9 | 33 | 15,727 | NEG-M ATCC 30224 | GCA_000004985 | January 2010 | [21] |
N. lovaniensis | PacBio – RSII | 30.9 | 37 | 15,195 | ATCC 30569 | GCA_003324165 | July 2018 | [48] |
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