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Table 2

Homology analysis of T. multiceps and T. hydatigena isolates at the three mitochondrial loci.

Taenia species Loci amplified Accession no.a (Specimen code) Accession no.b Homology Codonc/Amino acid (Nucleotide Position)d
T. multiceps cox1 KT258024 (IM1) EF393620 100%  
KT258025 (IM2, IM5-8) JX507230 99.53% CC(A to G)/P(76); GT(T to C)/V(310)
  nad4 KT258028 (IM1) KC794808 99.09% (G to A)TT/(V to I)(88); GC(C to T)/A(225); (G to A)TG/(V to M)(529); AC(T to C)/T(570); AG(A to G)/S(645); TC(G to A)/S(654)
KT258029 (IM2, IM5-8) KC794808 99.70% GC(C to T)/A (225); TC(G to A)/S(654)
  cytb KT258032 (IM1) FJ495086 100%  
KT258033 (IM2, IM5-8) JX546908 99.83% TC(A to G)/S(379)
T. hydatigena cox1 KT258026 (IM3) AB792724 99.53% TA(C to T)/Y(13); TG(G to A)/W(397)
KT258027 (IM4) AB792724 99.76% TA(C to T)/Y(13)
  nad4 KT258030 (IM3) KC794844 98.94% TT(A to G)/L(39); AT(C to T)/I(69); TA(C to T)/Y(150); G(A to G)G/(E to G)(323); TT(A to G)/L(615); TG(C to T)/C(651); TC(G to A)/S(654)
KT258031 (IM4) KC794845 98.94% TT(A to G)/L(39); AT(C to T)/I(69); TA(C to T)/Y(150); CT(A to G)/L(159); TG(G to A)/W(333); TG(C to T)/C(651); TC(G to A)/S(654)
  cytb KT258034 (IM3) FJ518620 99.83% AT(A to G)/(I to M)(22)
KT258035 (IM4) FJ518620 99.83% GG(C to T)/G(46)
a

Accession no. indicating the representative sequences obtained in the present study.

b

Accession no. indicating that the reference sequences here have the largest similarity with those obtained in the present study.

c

All the base changes in brackets are from reference sequences to representative sequences obtained in the present study.

d

Nucleotide position numbers are according to the sequences obtained in the present study, with the beginning of the coding region of each mt gene as position no. 1.

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