Homology analysis of T. multiceps and T. hydatigena isolates at the three mitochondrial loci.
|Taenia species||Loci amplified||Accession no.a (Specimen code)||Accession no.b||Homology||Codonc/Amino acid (Nucleotide Position)d|
|T. multiceps||cox1||KT258024 (IM1)||EF393620||100%|
|KT258025 (IM2, IM5-8)||JX507230||99.53%||CC(A to G)/P(76); GT(T to C)/V(310)|
|nad4||KT258028 (IM1)||KC794808||99.09%||(G to A)TT/(V to I)(88); GC(C to T)/A(225); (G to A)TG/(V to M)(529); AC(T to C)/T(570); AG(A to G)/S(645); TC(G to A)/S(654)|
|KT258029 (IM2, IM5-8)||KC794808||99.70%||GC(C to T)/A (225); TC(G to A)/S(654)|
|KT258033 (IM2, IM5-8)||JX546908||99.83%||TC(A to G)/S(379)|
|T. hydatigena||cox1||KT258026 (IM3)||AB792724||99.53%||TA(C to T)/Y(13); TG(G to A)/W(397)|
|KT258027 (IM4)||AB792724||99.76%||TA(C to T)/Y(13)|
|nad4||KT258030 (IM3)||KC794844||98.94%||TT(A to G)/L(39); AT(C to T)/I(69); TA(C to T)/Y(150); G(A to G)G/(E to G)(323); TT(A to G)/L(615); TG(C to T)/C(651); TC(G to A)/S(654)|
|KT258031 (IM4)||KC794845||98.94%||TT(A to G)/L(39); AT(C to T)/I(69); TA(C to T)/Y(150); CT(A to G)/L(159); TG(G to A)/W(333); TG(C to T)/C(651); TC(G to A)/S(654)|
|cytb||KT258034 (IM3)||FJ518620||99.83%||AT(A to G)/(I to M)(22)|
|KT258035 (IM4)||FJ518620||99.83%||GG(C to T)/G(46)|
Accession no. indicating that the reference sequences here have the largest similarity with those obtained in the present study.
All the base changes in brackets are from reference sequences to representative sequences obtained in the present study.
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