Open Access
Table 2
Annotations and gene organization of Seuratascaris physalis bazhaiensis n. subsp.
| Gene | Type | Start (bp) | End (bp) | Length (bp) | Start Codon | Stop Codon | Anticodon | Strand | Gap or overlap |
|---|---|---|---|---|---|---|---|---|---|
| cox1 | CDS | 1 | 1575 | 1575 | ATT | TAG | + | −1 | |
| tRNA-Cys (C) | tRNA | 1575 | 1630 | 56 | gca | + | 0 | ||
| tRNA-Met (M) | tRNA | 1631 | 1692 | 62 | cau | + | 0 | ||
| tRNA-Asp (D) | tRNA | 1693 | 1748 | 56 | guc | + | 2 | ||
| tRNA-Gly (G) | tRNA | 1751 | 1806 | 56 | ucc | + | 0 | ||
| cox2 | CDS | 1807 | 2502 | 696 | ATT | TAA | + | 4 | |
| tRNA-His (H) | tRNA | 2507 | 2562 | 56 | gug | + | 0 | ||
| rrnL | rRNA | 2563 | 3508 | 946 | + | 0 | |||
| nad3 | CDS | 3509 | 3856 | 348 | ATT | TAG | + | 2 | |
| nad5 | CDS | 3859 | 5442 | 1584 | ATT | TAG | + | −2 | |
| tRNA-Ala (A) | tRNA | 5441 | 5499 | 59 | ugc | + | 0 | ||
| tRNA-Pro (P) | tRNA | 5500 | 5554 | 55 | ugg | + | −1 | ||
| tRNA-Val (V) | tRNA | 5554 | 5608 | 55 | uac | + | 0 | ||
| nad6 | CDS | 5609 | 6046 | 438 | TTG | TAA | + | −40 | |
| nad4L | CDS | 6007 | 6279 | 273 | ATA | TAG | + | 0 | |
| tRNA-Trp (W) | tRNA | 6280 | 6334 | 55 | uca | + | −1 | ||
| tRNA-Glu (E) | tRNA | 6334 | 6388 | 55 | uuc | + | 0 | ||
| rrnS | rRNA | 6389 | 7092 | 704 | + | 0 | |||
| tRNA-Ser2 (S2) | tRNA | 7093 | 7143 | 51 | uga | + | 0 | ||
| NCR | Non-coding region | 7144 | 7483 | 340 | + | 0 | |||
| tRNA-Asn (N) | tRNA | 7484 | 7540 | 57 | guu | + | 2 | ||
| tRNA-Tyr (Y) | tRNA | 7543 | 7598 | 56 | gua | + | 0 | ||
| nad1 | CDS | 7599 | 8471 | 873 | TTG | TAG | + | 3 | |
| atp6 | CDS | 8475 | 9072 | 598 | TTG | T | + | 0 | |
| tRNA-Lys (K) | tRNA | 9073 | 9135 | 63 | uuu | + | 2 | ||
| tRNA-Leu2 (L2) | tRNA | 9138 | 9192 | 55 | uaa | + | 0 | ||
| tRNA-Ser1 (S1) | tRNA | 9193 | 9242 | 50 | ucu | + | 0 | ||
| nad2 | CDS | 9243 | 10085 | 843 | TTG | TAG | + | 1 | |
| tRNA-Ile (I) | tRNA | 10087 | 10141 | 55 | gau | + | 10 | ||
| tRNA-Arg (R) | tRNA | 10152 | 10205 | 54 | acg | + | 0 | ||
| tRNA-Gln (Q) | tRNA | 10206 | 10259 | 54 | uug | + | 5 | ||
| tRNA-Phe (F) | tRNA | 10265 | 10333 | 69 | gaa | + | −1 | ||
| cytb | CDS | 10333 | 11425 | 1093 | ATT | T | + | 0 | |
| tRNA-Leu1 (L1) | tRNA | 11426 | 11482 | 57 | uag | + | 0 | ||
| cox3 | CDS | 11483 | 12250 | 768 | TTG | TAG | + | 2 | |
| tRNA-Thr (T) | tRNA | 12253 | 12309 | 57 | ugu | + | −10 | ||
| nad4 | CDS | 12300 | 13538 | 1239 | TTG | TAA | + |
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