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Table 3

Intra-assemblage substitutions in bg, gdh, and tpi sequences within G. duodenalis assemblage E.

Sequence (no.) Nucleotide positions
GenBank ID
gdh 51 72 105 166 210 215 282 327 455
E9 (1) C C C A G T T T G KT698969
E45 (4) A KC960648
E46 (2) G MK442907
E47 (1) T G KY655475
E48 (4) G G MK442905
E49a (1) G G OL456202
E50a (1) G OL456203
E51a (2) A OL456204
E52a (1) T T G OL456206
bg 68 110 173 275 401 416
E1 (6) C C A C G C MK610388
E27 (1) T T G T MK610379
E35 (29) T MK610387
E36 (16) T A T MT108433
E37 (2) T T MF671888
E38 (1) T G T MT713328
E39 (1) T MK610389
E40 (1) T T T LC484286
tpi 37 58 91 95 145 316
E1 (1) G T T A A T KY769102
E3 (2) G KY769100
E5 (1) A G EF654686
E32a(1) C G A C OL456207

N-dash (–) indicates that the sequence is the same as the reference sequence.


Novel sequence.

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