Open Access
Table 3
Intra-assemblage substitutions in bg, gdh, and tpi sequences within G. duodenalis assemblage E.
| Sequence (no.) | Nucleotide positions |
GenBank ID | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| gdh | 51 | 72 | 105 | 166 | 210 | 215 | 282 | 327 | 455 | |
| E9 (1) | C | C | C | A | G | T | T | T | G | KT698969 |
| E45 (4) | – | – | – | – | – | – | – | – | A | KC960648 |
| E46 (2) | – | – | – | – | – | – | G | – | – | MK442907 |
| E47 (1) | – | – | T | – | – | – | – | – | G | KY655475 |
| E48 (4) | – | – | – | – | – | – | G | – | G | MK442905 |
| E49a (1) | – | – | – | G | – | G | – | – | – | OL456202 |
| E50a (1) | – | – | – | – | – | – | – | G | – | OL456203 |
| E51a (2) | – | – | – | – | A | – | – | – | – | OL456204 |
| E52a (1) | T | T | – | – | – | – | – | – | G | OL456206 |
| bg | 68 | 110 | 173 | 275 | 401 | 416 | ||||
| E1 (6) | C | C | A | C | G | C | MK610388 | |||
| E27 (1) | T | T | G | – | – | T | MK610379 | |||
| E35 (29) | – | – | – | – | – | T | MK610387 | |||
| E36 (16) | T | – | – | – | A | T | MT108433 | |||
| E37 (2) | T | – | – | – | – | T | MF671888 | |||
| E38 (1) | T | – | G | – | – | T | MT713328 | |||
| E39 (1) | T | – | – | – | – | – | MK610389 | |||
| E40 (1) | T | – | – | T | – | T | LC484286 | |||
| tpi | 37 | 58 | 91 | 95 | 145 | 316 | ||||
| E1 (1) | G | T | T | A | A | T | KY769102 | |||
| E3 (2) | – | – | – | G | – | – | KY769100 | |||
| E5 (1) | A | – | – | – | G | – | EF654686 | |||
| E32a(1) | – | C | G | A | – | C | OL456207 | |||
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