Open Access
Table 2
Molecular identification of processed cercariae.
| Cercarial reference | Cercarial identification | Genbank accession numbers obtained in the present study (in red) and homologies with those extracted from Genbank (in black). In grey, no molecular identification. |
||
|---|---|---|---|---|
| D2 | ITS2 | ITS1 | ||
| FODR1 |
Trichobilharzia anseri
|
MK168701 100% with FJ93861
|
MK168683 100% with FJ469785
|
MK168665 99% with FJ469785
|
| LFDR1 | Diplostomum pseudospathaceum | MK168711 99% with KR269766 | MK168684 100% with KR269766 | MK168668 99% with KR269766 |
| LFDR3 | MK168712 99% with KR269766 | MK168685 100% with KR269766 | MK168669 99% with KR269766 | |
| LFDR4 |
|
MK168713 99% with KR269766
|
MK168686 100% with KR269766
|
MK168670 99% with KR269766
|
| LFZE1 | Tylodelphys sp. | MK168714 no homology | MK168689 99% with KY462834 | MK168673 99% with Tylodelphys clavata JQ665459 |
| LFZE2 | MK168715 no homology | MK168690 99% with KY462834 | MK168674 99% with Tylodelphys clavata JQ665459 | |
| LFZE3 |
|
MK168716 no homology |
MK168691 99% with KY462834
|
MK168675 99% with Tylodelphys clavata
JQ665459
|
| LFJO1 | Australapatemon sp. | MK168709 99% with Australapatemon burti MF398342 | MK168687 98% with Australapatemon burti JX9777785 | MK168671 99% with KY570947 |
| LFJO2 | MK168710 99% with Australapatemon burti MF398342 | MK168688 98% with Australapatemon burti JX9777785 | MK168672 99% with KY570946 | |
| LFDC42 | MK168703 99% with Australapatemon burti MF398342 | MK168666 99% with KY570947 | ||
| LFDC48 | MK168724 99% with Australapatemon burti MF398342 | MK168667 99% with KY570947 | ||
| LFDC86 |
|
MK168735 99% with Australapatemon burti
MF398342
|
MK500246 99% with KY570947
|
|
| LFDC43 | Cotylurus sp. | MK168704 99% with Cotylurus cornutus KY513182 | ||
| LFDC88 | MK168726 99% with Cotylurus cornutus KY513182 | |||
| LFDC89 | MK168736 99% with Cotylurus cornutus KY51318 | |||
| LFDC90 | MK168738 99% with Cotylurus cornutus KY513182 | |||
| LFDC91 |
|
MK168739 99% with Cotylurus cornutus
KY513182
|
|
|
| LFDC83 |
Posthodiplostomum sp. |
MK168734 no homology |
|
MK500245 99% with Posthodiplostomum cuticola
MF171001
|
| LFDC96 | Parastrigea sp. | MK168740 98% with Apharyngostrigea cornu MF398345 | MK500247 99% with Parastrigea robusta MF537208 | |
| LFDC37 | Alaria alata | MK168699 100% with JF340222 | ||
| LFDC39 | MK168745 100% with AF184263 | MK168700 100% with JF340222 | ||
| LFDC40 | MK168746 100% with AF184263 | |||
| LFDC41 | MK168702 100% with AF184263 | |||
| LFDC44 | MK168705 100% with AF184263 | |||
| LFDC45 | MK168706 100% with AF184263 | |||
| LFDC53 | MK168707 100% with AF184263 | |||
| LFDC54 | MK168708 100% with AF184263 | |||
| LFDC57 | ||||
| LFDC59 | ||||
| LFDC61 | ||||
| LFDC64 | MK168729 100% with JF340217 | |||
| LFDC68 | MK168737 100% with JF340217 | |||
| LFDC71 | ||||
| LFDC72 | MK168725 100% with JF340217 | |||
| LFDC73 | MK168728 100% with JF340217 | |||
| LFDC74 | ||||
| LFDC75 | ||||
| LFDC76 | ||||
| LFDC77 | ||||
| LFDC78 | ||||
| LFDC80 | ||||
| LFDC82 | ||||
| LFDC92 | ||||
| LFDC93 | ||||
| LFDC94 | ||||
| LFDC95 | ||||
| LFDC97 | MK168741 100% with JF340217 | |||
| LFDC98 | MK168742 100% with JF340217 | |||
| LFDC99 | MK168743 100% with JF340217 | |||
| LFDC100 | MK168730 100% with JF340217 | |||
| LFDC101 | MK168731 100% with JF340217 | |||
| LFDC102 | MK168732 100% with JF340217 | |||
| LFDC103 |
|
MK168733 100% with JF340217
|
|
|
| ECDC16 | Echinoparyphium sp | MK168717 99% with Echinoparyphium ellisi KY436410 | ||
| ECDC26 |
|
MK168744 99% with Echinoparyphium ellisi
KY436410
|
|
|
| ECJO1 | Echinostoma revolutum | MK168720 100% with KP065596 | MK168694 99% with AY68930 | MK168678 99% with KM20150 |
| ECJO2 | MK168727 100% with KP065596 | MK168695 99% with AY68930 | MK168679 99% with KM20150 | |
| ECJO3 |
|
MK168721 100% with KP065596
|
MK168696 99% with AY68930
|
MK168680 99% with KM20150
|
| ECDR1 | Petasiger phalacrocoracis | MK168718 100% with JQ425593 | MK168692 100% with JQ425593 | MK168676 99% with KJ720683 |
| ECDR2 |
|
MK168719 100% with JQ425593
|
MK168693 100% with JQ425593
|
MK168677 99% with KJ720683
|
| XIDR2 | Plagiorchis sp | MK168722 99% with KF533392 | MK168697 no homology | MK168681 99% with JX522536 |
| XIDR3 | MK168723 99% with KF533392 | MK168698 no homology | MK168682 100% with JX522536 | |
FO: ocellated pigmented furcocercariae, LF: furcocercariae with or not eyes spots, EC: cercariae of Echinostomidae, XI: Xiphidiocercariae, DR: Der-Chantecocq lake, DC: National Domain of Chambord, ZE: Zebulle Park Chevenon, JO, Jouaignes.
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