Open Access
Table 4
Prevalence and genotype distribution of Enterocytozoon bieneusi in rodents in different countries or areas.
| Country | Rodent species | Feeding habits | No. positive/No. tested (%) | Genotype (n) | Reference |
|---|---|---|---|---|---|
| Iran | Brown rat (Rattus norvegicus) | Wild | 13/146 (8.9) | D (11), M (2) | [42] |
| Black rat (Rattus rattus) | Wild | 1/14 (7.1) | D (1) | [42] | |
| Japan | Pallas’s squirrel (Callosciurus erythraeus) | Wild | 55/423 (13.0) | SCC-2 (55) | [27] |
| Peru | Guinea pig (Cavia porcellus) | Pet | 10/67 (14.9) | Peru16 (10) | [4] |
| Poland | Striped field mouse (Apodemus agrarius) | Wild | 79/184 (42.9) | D (6), WR5 (1), WR7 (1), gorilla 1 (1), WR8 (2) | [31] |
| Yellow-necked mouse (Apodemus flavicollis) | Wild | 18/60 (30.0) | WR4 (1), WR6 (6), WR1 (1), WR9 (1), D (2) | [31] | |
| Bank vole (Myodes glareolus) | Wild | 18/46 (39.1) | WR6 (2), WR10 (2), WR2 (1), D (2), | [31] | |
| House mice (Mus musculus) | Wild | 6/21 (28.6) | WR3 (1) | [31] | |
| Slovakia | House mice (Mus musculus) | Wild | 3/280 (1.1) | Unknown (3) | [6] |
| Czech-Germany border | House mice (Mus musculus) | Wild | 31/289 (10.7) | EpbA (2), D (10), PigEBITS5 (7), C (2), H (1), CZ3 (4), Peru 8 (4), S6 (1) | [36] |
| USA | Black-tailed prairie dog (Cynomys ludovicianus) | Farmed | 14/29 (48.3) | Row (14) | [34] |
| Beaver (Castor canadensis) | Wild | 13/85 (15.3) | WL7 (1), WL9 (1), WL12 (1), WL15 (1), WL8 (4), WL13 (5) | [39] | |
| Muskrat (Ondatra zibethicus) | Wild | 20/239 (8.4) | WL4 (10), WL5 (1), WL6 (1), WL8 (2), WL10 (1), WL14 (1), WL15 (1), WL16 (3) | [39] | |
| Eastern gray squirrel (Sciurus carolinensis) | Wild | 11/34 (32.4) | Type IV (3), WL4 (5), WW6 (2), PtEbV + WL21 (1) | [13] | |
| Eastern chipmunk (Tamias striatus) | Wild | 5/7 (71.4) | Type IV (1), WL4 (3), WL23 (1) | [13] | |
| Woodchuck (Marmota monax) | Wild | 5/5 (100.0) | Type IV + WL20 (1), WL4 (2), WL22 (1), WW6 (1) | [13] | |
| Deer mouse (Peromyscus sp.) | Wild | 13/55 (23.6) | WL4 (10), WL23 (2), WL25 (1) | [13] | |
| Boreal red-backed vole (Myodes gapperi) | Wild | 1/5 (20.0) | WL20 + WL21 (1) | [13] | |
| Meadow vole (Microtus pennsylvanicus) | Wild | 3/10 (30.0) | Peru11 (1), Peru11 +type IV (1), WL21 + unknown (1) | [13] | |
| China | Red squirrel (Sciurus vulgaris) | Pet | 61/314 (19.4) | D (27), SCC-2 (18), SCC-3 (12), RS01 (2), RS02 (2) | [8] |
| Edwards’s long-tailed giant rat (Leopoldamys edwardsi) | Wild | 39/111 (35.1) | D (14), K (8), PigEBITS7 (22), Peru8 (2), GDR-2 (1), GDR-1 (10), CQR-2 (15), CQR-3 (1), GDR-3 (1), GDR-1 (2) | [12] | |
| Bower’s white-toothed rat (Berylmys bowersi) | Wild | 37/117 (31.6) | [12] | ||
| Brown rat (Rattus norvegicus) | Wild | 19/242 (7.9) | D (17); Peru6 (2) | [56] | |
| Laboratory rat | Lab | 14/291 (4.8) | EbpA (7), EbpC (3), CHY1 (2), N (1), SHR1 (1) | [18] | |
| Fancy rats (Rattus norvegicus domestica) | Pet | 17/152 (11.2) | D (12), Peru11 (3), S7 (1), SCC-2 (1) | [45] | |
| Guinea pig (Cavia porcellus) | Pet | 35/173 (20.2) | S7 (30), PGP (5) | [45] | |
| Himalayan marmots (Marmota himalayana) | Wild | 47/399 (11.8) | YAK1 (17), ZY37 (27), SN45 (1), XH47 (1), ZY83 (1) | [51] | |
| Alashan ground squirrels (Spermophilus alashanicus) | Wild | 3/99 (3.0) | HN39 (1), HN96 (1), YAK1 (1) | [51] | |
| Asian house rat (Rattus tanezumi) | Wild | 31/134 (23.1) | PigEbITS7 (16); D (12); ESH-02 (1); Type-IV (1); EbpA (1) | [59] | |
| Brown rat (Rattus norvegicus) | Wild | 8/56 (14.3) | D (3); PigEbITS7 (1); Type IV (1); Peru 8 (1); HNR-I (1); HNR-II (1) | [59] | |
| Edwards’s long-tailed giant rat (Leopoldamys edwardsi) | Wild | 3/38 (7.9) | D (2); HNR-III (1) | [59] | |
| Chinese white-bellied rat (Niviventer confucianus) | Wild | 6/33 (18.2) | D (3); PigEBITS7 (2); Type-IV (1) | [59] | |
| Indo-Chinese Forest rat (Rattus andamanensis) | Wild | 5/54 (9.3) | D (3); Type-IV (1); HNR-III (1) | [59] | |
| Lesser rice-field rat (Rattus losea) | Wild | 16/44 (36.4) | HNR-VII (15); D (1) | [59] | |
| Red-bellied squirrel (Callosciurus erythraeus) | Wild | 1/24 (4.2) | D (1) | [59] | |
| Asiatic brush-tailed porcupine (Atherurus macrourus) | Farmed | 7/93 (7.5) | D (3); HNR-VI (2); S7 (1); CHG5 (1) | [59] | |
| Bamboo rat (Rhizomyidae) | Farmed | 18/117 (15.4) | D (15); Peru 11 (1); HNR-IV (1); HNR-V (1) | [59] | |
| Rodents (Rattus norvegicus + Mus musculus) | Wild | 8/99 (4.0) | CHG14 (3), BEB6 (2), D (2), CHG2 (1) | [54] | |
| Chipmunks (Eutamias asiaticus) | Farmed | 13/103 (12.6) | D (3); Nig 7 (2); CHY1 (3); SCC-1 (4); SCC-4 (1) | [10] | |
| Chipmunks (Eutamias asiaticus) | Pet | 36/176 (20.5) | D (3); Nig 7 (2); CHG9 (2); CHY1 (2); SCC-1 (13); SCC-2 (9); SCC-3 (5); | [10] | |
| Red-bellied Tree squirrel (Callosciurus erythraeus) | Farmed | 8/49 (16.3) | D (7), CE02 (1) | [9] | |
| Red-bellied Tree squirrel (Callosciurus erythraeus) | Pet | 16/95 (16.8) | D (11), EbpC (3), SC02 (1) CE01 (1), | [9] | |
| Long-tailed chinchilla (Chinchilla lanigera) | Farmed | 3/58 (5.2) | BEB6 (1), D (2) | [32] | |
| Long-tailed chinchilla (Chinchilla lanigera) | Pet | 2/82 (2.4) | BEB6 (2) | [32] | |
| Coypu (Myocastor coypus) | Farmed | 127/308 (41.2) | CHN4 (111), EbpA (7), EbpC (8), CNCP1 (1) | [52] | |
| Laboratory rat | Lab | 9/118 (7.6) | J (2), BEB6 (7) | [48] | |
| Laboratory mice | Lab | 18/1027 (1.8) | D (1), J (4), BEB6 (6), CHG10 (1), Henan-IV (4), WL6 (2) | [48] | |
| Laboratory guinea pigs | Lab | 10/92 (10.9) | S7 (10) | [48] | |
| Hairless guinea pigs (Cavia porcellus) | Pet | 6/35 (17.1) | S7 (5), PGP (1) | [25] | |
| Hairless guinea pigs (Cavia porcellus) | Farmed | 40/289 (13.8) | S7 (37), PGP (3) | [25] | |
| Golden hamsters (Mesocricetus auratus) | Pet | 26/175 (14.9) | D (23), Henan-II (1), SHW5 (1), Ebph1 (1) | [26] | |
| Siberian hamsters (Phodopus sungorus) | Pet | 16/175 (9.1) | Ebph2 (9), D (4), Ebph3 (1), Ebph4 (1), Ebph5 (1) | [26] | |
| Brown rat (Rattus norvegicus) | Wild | 53/399 (13.3) | EbpA (6), EbpC (19), D (17), ZJR1 (1), ZJR2 (1), ZJR3 (1), ZJR4 (1), ZJR5 (1), ZJR6 (1), ZJR7 (2), XJP-II (1), NCF2 (1), SDR1 (1) | [29] | |
| House mice (Mus musculus) | Wild | 5/74 (6.8) | GXR1 (5) | [29] | |
| Daurian ground squirrel (Spermophilus dauricus) | Wild | 4/41 (9.8) | EbpC (1), HLJC1 (2), HLJC2 (1) | [29] | |
| Plateau zokor (Myospalax baileyi) | Wild | 4/98 (4.1) | QH219-5, QH219-9, QH219-13, QH219-21 | [14] | |
| Asiatic brush-tailed porcupines (Atherurus macrourus) | Farmed | 24/164 (14.6) | D (2), EbpD (2), EbpA (1), EbpC (1), ETMK5 (7), HNR-VII (1), HNHZ-I to HNHZ-IV (one each), S7 (1), TypeIV (4) HNPL-III (1), | [57] | |
| Bamboo rat (Rhizomys sinensis) | Farmed | 128/303 (42.2) | D (76), Henan-III (21), HNZS-I (1), KIN-1 (11), SHW7 (19) | [57] | |
| Bamboo rat (Rhizomys sinensis) | Farmed | 22/435 (5.1) | D (17), J (1), BR1 (1), BR2 (1), EbpA (1), PigEBITS7 (1) | [44] |
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