Open Access
Table 2
Similarity analysis of SSU-rRNA, bg, gdh, and tpi sequences within G. duodenalis assemblage A, assemblage B, and assemblage E.
| Genes, subassemblages (n) | Accession number(s) | Identities/Nucleotide positions | Ref accession numbers in host from country | |
|---|---|---|---|---|
| SSU-rRNA | ||||
| ssuB1 (13) | PP356053 | 100%/– | HQ616612a from Lemur catta in Spain | |
| ssuB2 (4) | PP356052 | 99.59%/(C to T at position 6) | ||
| ssuB3 (1) | PP356054 | 99.59%/(A to G at position 7) | ||
| ssuB4 (1) | PP356055 | 99.59%/(G to A at position 138) | ||
| ssuA (1) | PP356056 | 100%/– | OR916207b in Lynx pardinus from Spain | |
| ssuE (2) | PP356057 | 100%/– | OR359372c in sheep from China | |
| bg | ||||
| bgB1 (11) | PP388943 | 100%/– | OM115991 from humans in Iran | |
| bgB2 (1) | PP388944 | 100%/– | OM115989 from humans in Iran | |
| bgB3 (3) | PP388945 | 99.79%/(A delete at position 10) | KJ888976 from Macaca mulatta in China | |
| bgB4 (3) | PP388946 | 99.79%/(A delete at position 10) | MT487587 from a masked palm civet in China | |
| bgB5 (1) | PP388947 | 99.79%/(A delete at position 10) | MG736242 from a human in Egypt | |
| bgA (1) | PP388948 | 99.57%/(A to G at position 18 and G to A at position 366) | ON168867 from a pig in China | |
| gdh | ||||
| gdhB1 (8) | PP388939 | 100%/– | EU834844 in human from Belgium | |
| gdhB2 (6) | PP388940 | 99.60%/(T to G at position 427 and A to G at position 463) | KF679732 in a rhesus macaque from China | |
| gdhB3 (3) | PP388941 | 99.80%/(G to A at position 364) | MK952603 in a golden monkey from China | |
| gdhB4 (2) | PP388942 | 99.80%/(C to T at position 145) | MK952600 in a Ring-tailed Lemur from China | |
| tpi | ||||
| tpiB (7) | PP388936 | 99.62%/(C to T at position 12, and C to T at position 490) | MG736281 from a human in Egypt | |
| 99.62%/(G to T at position 12, and A to G at position 24) | KX085491 from a human in Brazil | |||
| tpiE1 (1) | PP388938 | 99.81% (C to T at position 101) | MH079446 from cattle from China | |
| tpiE2 (1) | PP388937 | 99.81% (G to A at position138) | MH079446 from cattle from China | |
aAnother 91 sequences stored in GenBank.
bAnother 48 sequences stored in GenBank.
cAnother 15 sequences stored in GenBank.
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