Open Access
Table 4
Comparison of Blastocystis subtype data in a set of 83 qPCR-positive samples obtained by Sanger sequencing (results obtained in previous study Lhotská et al., 2020) and next-generation sequencing (NGS).
| Sample No. | Subtype |
Sample No. | Subtype |
||
|---|---|---|---|---|---|
| Sanger sequencing | NGS | Sanger sequencing | NGS | ||
| B1 | ST3 | ST3 | B225 | ST1 | ST1 |
| B2 | ST1 | ST1 | B226 | ST1 | ST1 |
| B9 | ST1 | ST1 | B231 | ST3 | ST3 + ST1 |
| B10 | – | – | B235 | ST3 | ST3 |
| B13 | ST1 | ST1 | B240 | – | ST3 |
| B15 | ST3 | ST3 | B248 | – | – |
| B19 | ST3 | ST3 | B277 | ST7 | – |
| B24 | ST6 | ST6 | B292 | ST7 | ST7 |
| B30 | ST3 | ST3 | B300 | ST4 | ST4 |
| B31 | ST3 | – | B303 | ST7 | ST7 |
| B33 | ST3 | ST3 | B312 | ST3 | ST3 |
| B35 | – | – | B313 | ST3 | ST3 |
| B36 | ST1 | ST1 | B327 | ST2 | ST2 |
| B37 | ST2 | – | B336 | ST3 | ST3 |
| B38 | – | – | B339 | ST1 | ST1 |
| B41 | – | ST3 | B341 | ST3 | ST3 |
| B42 | ST1 | ST1 | B343 | ST5 | ST5 |
| B45 | ST1 | ST1 + ST7 | B345 | ST6 | ST6 |
| B49 | ST1 | ST1 | B352 | ST3 | ST3 + ST2 |
| B50 | – | – | B353 | ST1 + ST3 | ST1 + ST3 |
| B54 | – | – | B356 | ST3 | – |
| B55 | ST3 | ST3 | B363 | ST3 | ST3 |
| B59 | ST4 | ST4 | B364 | ST3 | ST3 + ST2 |
| B62 | – | – | B365 | ST7 | ST7 + ST3 |
| B65 | ST4 | ST4 | B371 | ST4 | ST4 |
| B68 | ST3 | ST3 | B372 | – | ST4 |
| B82 | ST2 | ST2 | B373 | ST4 | ST4 |
| B86 | ST3 | ST3 | B374 | ST2 | ST2 |
| B99 | ST3 | ST3 | B375 | ST1 | ST1 |
| B113 | ST2 | ST2 | B380 | ST3 | ST3 |
| B114 | – | ST2 | B393 | ST7 | – |
| B115 | ST7 | ST7 | B397 | ST2 | ST2 |
| B120 | ST1 | ST1 | B398 | – | – |
| B126 | ST6 | ST6 | B405 | ST6 | ST6 |
| B144 | – | ST5 | B412 | ST2 | ST2 |
| B184 | ST3 | ST3 | B413 | ST4 | ST4 |
| B185 | ST6 | ST6 | B417 | ST2 | ST2 |
| B189 | – | – | B418 | ST2 | ST2 |
| B195 | ST3 | ST3 | B424 | ST3 | ST3 |
| B201 | ST3 | ST3 | B425 | ST2 | ST2 |
| B220 | ST3 | ST3 | B431 | ST4 | ST4 |
| B224 | ST1 | ST1 | |||
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