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Table 2

Genetic diversity indices. Mean expected heterozygosity (He), total number of alleles detected (A), allelic richness (Ar) rarefied to 362 diploid individuals per population, mean inbreeding coefficient (FIS), and the probability of deviation from Hardy–Weinberg equilibrium (PHWE) for each microsatellite locus per site. n, number of miracidia genotyped per site.

Locus Adzopé (n = 440)
Agboville (n = 465)
Duekoué (n = 527)
Sikensi (n = 534)
Total (n = 1966)
He A Ar F IS P HWE He A Ar F IS P HWE He A Ar F IS P HWE He A Ar F IS P HWE He A Ar
Sh9 0.72 9 8.86 0.37 <0.001 0.58 11 10.49 0.41 <0.001 0.78 12 11.67 0.50 <0.001 0.54 10 8.68 0.33 <0.001 0.66 14 10.98
Sh3 0.83 14 13.96 0.20 <0.001 0.78 15 14.60 0.11 <0.001 0.88 16 15.53 0.08 <0.001 0.83 14 13.47 0.01 0.836 0.83 16 15.00
C102 0.44 4 3.84 0.10 0.220 0.46 6 5.76 −0.06 <0.001 0.43 7 6.70 0.08 0.819 0.50 5 4.66 −0.06 <0.001 0.46 7 6.05
Sh1 0.77 9 8.88 0.01 <0.001 0.68 9 8.55 −0.01 <0.001 0.75 12 11.97 0.03 <0.001 0.74 8 7.99 −0.03 <0.001 0.74 13 11.85
Sh14 0.81 14 14.00 0.04 <0.001 0.83 14 13.84 0.03 <0.001 0.83 15 14.63 0.00 <0.05 0.82 16 15.56 −0.01 <0.001 0.82 17 15.78
Sh6 0.53 7 6.98 0.24 <0.001 0.58 7 6.99 0.07 <0.001 0.48 7 7.00 −0.01 <0.001 0.60 7 6.99 −0.11 <0.001 0.55 7 7.00
C111 0.55 4 4.00 0.18 <0.001 0.44 5 5.00 0.11 <0.001 0.65 8 7.59 0.03 0.276 0.56 8 7.44 0.01 0.688 0.55 9 7.12
Sh7 0.68 7 6.83 0.26 <0.001 0.74 5 5.00 0.32 <0.001 0.64 7 6.99 0.31 <0.001 0.64 5 4.74 0.32 <0.001 0.68 7 6.69
Sh13 0.66 15 14.67 0.01 <0.001 0.51 14 13.37 0.01 <0.001 0.69 15 14.52 −0.02 <0.001 0.71 14 13.64 −0.03 0.408 0.64 17 15.68
Sh4 0.74 9 9.00 0.05 <0.01 0.73 9 8.92 0.08 <0.001 0.80 11 10.82 0.04 <0.001 0.85 9 9.00 0.07 <0.001 0.78 11 10.22
Sh11 0.51 7 6.62 −0.01 <0.001 0.68 6 5.81 0.12 <0.001 0.46 8 7.54 0.13 <0.001 0.70 8 7.66 0.09 <0.001 0.59 10 7.80
Sh15 0.49 7 7.00 0.16 <0.001 0.54 6 6.00 0.17 <0.001 0.50 6 5.97 0.13 <0.001 0.46 6 6.00 −0.02 <0.001 0.50 7 7.00
Sh2 0.78 13 13.00 0.35 <0.001 0.80 12 12.00 0.32 <0.001 0.89 14 13.96 0.45 <0.001 0.86 12 12.00 0.35 <0.001 0.83 15 14.64
Sh5 0.73 10 9.90 0.44 <0.001 0.47 13 12.34 0.26 <0.001 0.80 15 14.70 0.10 <0.001 0.64 9 8.73 0.16 <0.001 0.66 16 13.95
Sh10 0.48 8 7.85 0.51 <0.001 0.53 6 5.79 0.35 <0.001 0.48 8 7.88 0.31 <0.001 0.33 7 6.64 0.10 <0.001 0.46 8 7.56
Sh12 0.10 4 3.83 −0.04 0.972 0.29 6 5.95 0.03 <0.001 0.07 7 6.06 −0.03 1.0 0.23 8 7.58 −0.06 <0.001 0.17 10 7.68
Mean 0.61 8.81 8.70 0.18 0.60 9.00 8.78 0.15 0.63 10.50 10.22 0.13 0.63 9.13 8.80 0.07 0.62 11.50 10.31
SE 0.19 3.60 3.61 0.17 0.15 3.61 3.47 0.14 0.22 3.61 3.59 0.17 0.18 3.28 3.22 0.15 0.18 3.88 3.65

SE: Standard error.

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