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Table 1

Statistical summary of the de novo assembled sequences from advanced third-stage Gnathostoma spinigerum larvae (aL3Gs).

Parameter Number
Sequencing results
 Total raw reads 61,602,864
 Total clean reads 56,710,418 (92.1%)
De novo assembly results
 Total number of contigs 117,204
 Average contig length (min-max length) 1,200 nt (201–22,386 nt)
 Total number of splice variant groups 86,312
 Average splice variant per groups (min-max) 2.2 (1–21)
Annotations results
 CDD annotation (%) 35,850 (96.6%)
 UniProt annotation (%) 14,064 (37.9%)
 GO annotation (%) 26,259 (70.8%)
Total annotation (%) 37,099 (100.0%)
With homologues in G. spinigerum
 Bilateria (%) 7,420 (20.0%)
Toxocara canis (%) 5,980 (16.1%)
Ascaris suum (%) 5,238 (14.1%)
Anisakis simplex (%) 1,674 (4.5%)
Ascaris lumbricoides (%) 1,399 (3.7%)
Enterobius vermicularis (%) 986 (2.7%)
GO function classification (%) 26,259 (70.8%)
 Biological process 11,439
 Cellular component 15,358
 Molecular function 19,775

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