Open Access
Table 1
Statistical summary of the de novo assembled sequences from advanced third-stage Gnathostoma spinigerum larvae (aL3Gs).
| Parameter | Number |
|---|---|
| Sequencing results | |
| Total raw reads | 61,602,864 |
| Total clean reads | 56,710,418 (92.1%) |
| De novo assembly results | |
| Total number of contigs | 117,204 |
| Average contig length (min-max length) | 1,200 nt (201–22,386 nt) |
| Total number of splice variant groups | 86,312 |
| Average splice variant per groups (min-max) | 2.2 (1–21) |
| Annotations results | |
| CDD annotation (%) | 35,850 (96.6%) |
| UniProt annotation (%) | 14,064 (37.9%) |
| GO annotation (%) | 26,259 (70.8%) |
| Total annotation (%) | 37,099 (100.0%) |
| With homologues in G. spinigerum | |
| Bilateria (%) | 7,420 (20.0%) |
| Toxocara canis (%) | 5,980 (16.1%) |
| Ascaris suum (%) | 5,238 (14.1%) |
| Anisakis simplex (%) | 1,674 (4.5%) |
| Ascaris lumbricoides (%) | 1,399 (3.7%) |
| Enterobius vermicularis (%) | 986 (2.7%) |
| GO function classification (%) | 26,259 (70.8%) |
| Biological process | 11,439 |
| Cellular component | 15,358 |
| Molecular function | 19,775 |
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