Open Access
Table 1.
List of Culicoides spp. used in the phylogenetic analyses, classification of Borkent, 2014.
| Subgenus | Taxa present |
Country | No. (codification) | GenBank accession number |
||
|---|---|---|---|---|---|---|
| Group | Species | COI | D1D2 | |||
| Anilomyia | C. metagonatus | EC | EC-meta-1-D458 | KY707782 | KF286339 | |
| C. chiopterus | FR | FR-chio1-P6C61 | KY707805 | KF286340 | ||
| C. dewulfi | FR | FR-dew1-P5C46 | HM022877 | KF286341 | ||
| FR-dew2- P3C17* | HM022878 | |||||
| C. dubitatus | MA | MA-dub1-D358 | KY707796 | KF286342 | ||
| GA | GA-dub2- D558 | KY707795 | KF286343 | |||
| MA | MA-dub3 D379 | KY707797 | KF286344 | |||
| Avaritia | C. imicola | TU | TU-im1-S4Cf3 | KJ729975 | KF286345 | |
| TU-im2-S6Cf111* | KJ729976 | |||||
| C. kibatiensis | MA | MA-kib1-D364* | KY707781 | KF286348 | ||
| MA-kib2-D401 | ||||||
| C. miombo | MA | MA-mio1-D394* | KY707800 | KF286349 | ||
| MA-mio2-D412 | ||||||
| C. sp. | GA | GA-img1-D439 | KY707791 | KF286346 | ||
| GA-img2-D550 | KY707790 | KF286347 | ||||
| C. obsoletus | FR | FR-obs-1-P2C12* | ||||
| FR-obs-2-D223 | HM022852 | KF286350 | ||||
| C. scoticus | FR | FR-sco1-P7C5 | HM022875 | KF286351 | ||
| FR-sco2 P6C25 | HM022857 | KF286352 | ||||
| Beltranmyia | C. circumscriptus | TU | TU-cir2-B1Cf31* | KJ729971 | KF286353 | |
| C. impunctatus | FR | FR-del2-D91 | KY707808 | KF286355 | ||
| FR-del3-D94* | ||||||
| Culicoides | C. lupicaris | FR | FR-lup1-P5C34 | KY707776 | KF286354 | |
| C. newsteadi | TU | TU-new1-S3CM42 | KKJ729989 | KF286356 | ||
| TU-new2-S6Cf51 | KJ729990 | KF286357 | ||||
| C. punctatus | FR | FR-pun1-D327 | KY707806 | KF286358 | ||
| FR-pun2-D242* | ||||||
| FR-pun3-D250* | ||||||
| Haematomyidium | C. limonensis | EC | EC-para2-D460 | KY707809 | KF286360 | |
| C. paraensis | EC | EC-para1-D423 | KF286359 | |||
| Hoffmania | Guttatus group | C. diabolicus | EC | EC-bat1-D451 | KY707783 | KF286361 |
| EC-bat2-D453 | KY707787 | KF286362 | ||||
| C. guttatus | EC | EC-gu1-D481 | KY707785 | KF286363 | ||
| Hylas group | C. hylas | EC | EC-hyl1-D449 | KF286364 | ||
| C. pseudoheliconiae | EC | EC-hyl2-D505 | KY707784 | KF286365 | ||
| Meijerehelea | C. distinctipennis | GA | GA-leu1 D555 | KY707792 | KF286366 | |
| Monoculicoides | C. nubeculosus | FR | FR-nub-D179 | KF178273 | KF286367 | |
| C. parroti | FR | FR-par-D27 | KF178276 | KF286368 | ||
| C. puncticollis | TU | TU-pco1-B7CM49 | KJ730002 | KF286369 | ||
| TU-pco2-B7Cf60* | KJ29998 | KJ730024 | ||||
| Oecacta | C. cataneii/ | TU | TU-cag1-B2CM132 | KJ729968 | KF286388 | |
| C. gejgelensis | TU-cag2-B2Cf34 | KJ729967 | KF286389 | |||
| C. festivipennis | FR | FR-fes2-D66 | KY707777 | KF286377 | ||
| FR-fes3-D103* | ||||||
| C. jumineri | TU | TU-jum1-S3Cf124 | KJ729979 | KF286383 | ||
| TU-jum2-S3CM1* | KJ729980 | KF286384 | ||||
| TU-jum3-S3CM71 | KJ729982 | KF286384 | ||||
| C. sahariensis | TU | TU-sah2-B28Cf6* | KJ30004 | KF286387 | ||
| Remmia | C. enderleini | MA | MA-scg2-D378* | KF186429 | KF286379 | |
| MA-scg3-D363 | ||||||
| C. kingi | TU | TU-kin1-S3Cf167 | KJ729985 | KF286338 | ||
| C. nevilli | MA | MA-scg1-D357 | KF186428 | KF286378 | ||
| Trithecoides | C. fulvithorax/C. ochrothorax | GA | GA-fuo1-D437 | KY707793 | KF286371 | |
| Wirthomyia | C. segnis | FR | FR-seg1-D113* | KY707778 | KF286372 | |
| FR-seg2-D108 | ||||||
| Unplaced 1 | Carpenteri group | C. belemensis | EC | EC-bel1-D477 | KY707786 | KF286373 |
| Unplaced 2 | Fluvialis group | C. castillae | EC | EC-cast1-D474 | KF286374 | |
| EC-cast2-D472* | ||||||
| C. tetrathyris like | EC | EC-fug3-D470 | KY707788 | KF286375 | ||
| C. tetrathyris | EC | EC-tetra1-D517 | KF286370 | |||
| Unplaced 3 | Leoni group | C. glabellus | EC | EC-leg1-D528 | KY707789 | KF286376 |
| Unplaced 4 | Milnei group | C. moreli | MA | MA-mor1-D420 | KY707804 | KF286382 |
| C. zuluensis | MA | MA-mig1-D388 | KY707802 | KF286380 | ||
| MA-mig2-D365 | KY707803 | KF286381 | ||||
| Unplaced 5 | C. paolae | TU | TU-pao2-S5CM1 | KJ729992 | KF286385 | |
| TU-pao3-S3Cf66 | KJ729991 | KF286386 | ||||
EC: Ecuador; FR: France; GA: Gabon; MA: Madagascar; TU: Tunisia. D1D2 rDNA sequences (*specimens having identical sequences) and COI sequences).
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